| | Pos | No | Class | C.P. | Team | Type | Best Time | Gap | | Ave. km/h | Driver 1 | B Time | Lap | Driver 2 | B Time | Lap | Driver 3 | B Time | Lap |
| | 1 | 24 | LMP2 | 1 | OAK RACING | MORGAN-JUDD | 1'34.253 | | | 174.284 | Cong Fu CHENG | 1'34.253 | 9 / 11 | David CHENG | | | Jeffrey LEE | | |
| | 2 | 18 | | 2 | KCMG | MORGAN-NISSAN | 1'34.311 | 0.058 | 0.058 | 174.177 | James WINSLOW | | | Hiroshi KOIZUMI | | | Richard BRADLEY | 1'34.311 | 6 / 11 |
| | 3 | 16 | SGT | 1 | TEAM MUGEN | HONDA CR-Z (ZF-2) | 1'38.241 | 3.988 | 3.930 | 167.209 | Hideki MUTOH | 1'38.241 | 6 / 7 | Yuhki NAKAYAMA | | | | | |
| | 4 | 55 | | 2 | AUTOBACS RACING TEAM AGURI | HONDA CR-Z (ZF-2) | 1'38.363 | 4.110 | 0.122 | 167.002 | Shinichi TAKAGI | 1'38.363 | 4 / 5 | Takashi KOBAYASHI | | | Tomoki NOJIRI | | |
| | 5 | 61 | | 3 | R&D SPORT | SUBARU BRZ GT300 | 1'38.528 | 4.275 | 0.165 | 166.722 | Tetsuya YAMANO | | | Kota SASAKI | 1'38.528 | 4 / 6 | | | |
| | 6 | 11 | | 4 | GAINER | MERCEDES-BENZ SLS AMG GT3 | 1'38.910 | 4.657 | 0.382 | 166.078 | Katsuyuki HIRANAKA | 1'38.910 | 3 / 5 | Bjorn WIRDHEIM | | | | | |
| | 7 | 5 | | 5 | TEAM MACH | NISSAN GT-R NISMO GT3(R35) | 1'38.936 | 4.683 | 0.026 | 166.035 | Tetsuji TAMANAKA | | | Naoya YAMANO | 1'38.936 | 4 / 6 | | | |
| | 8 | 2 | | 6 | Cars Tokai Dream28 | MCLAREN MP4-12C GT3 | 1'39.059 | 4.806 | 0.123 | 165.828 | Kazuho TAKAHASHI | | | Hiroki KATOH | 1'39.059 | 3 / 5 | | | |
| | 9 | 62 | | 7 | LEON RACING | MERCEDES-BENZ SLS AMG GT3 | 1'39.310 | 5.057 | 0.251 | 165.409 | Haruki KUROSAWA | 1'39.310 | 4 / 6 | Tsubasa KUROSAWA | | | | | |
| | 10 | 52 | | 8 | OKINAWA-IMP RACING with SHIFT | MERCEDES-BENZ SLS AMG GT3 | 1'39.471 | 5.218 | 0.161 | 165.142 | Hironori TAKEUCHI | | | Takeshi TSUCHIYA | 1'39.471 | 3 / 5 | Motoyoshi YASHIDA | | |
| | 11 | 007 | GTC | 1 | CRAFT RACING | ASTON MARTIN VANTAGE GT3 | 1'39.520 | 5.267 | 0.049 | 165.060 | Frank YU | | | Richard LYONS | 1'39.520 | 6 / 7 | | | |
| | 12 | 77 | | 2 | AF CORSE | FERRARI 458 GT3 | 1'39.727 | 5.474 | 0.207 | 164.718 | Steve WYATT | | | Michele RUGOLO | | | Andrea BERTOLINI | 1'39.727 | 5 / 7 |
| | 13 | 0 | SGT | 9 | Team TAISAN KEN ENDLESS | PORSCHE 911 GT3 R (997) | 1'39.778 | 5.525 | 0.051 | 164.633 | Kyosuke MINEO | | | Naoki YOKOMIZO | 1'39.778 | 4 / 5 | | | |
| | 14 | 30 | | 10 | apr | NISSAN GT-R NISMO GT3(R35) | 1'40.112 | 5.859 | 0.334 | 164.084 | Yuki IWASAKI | 1'40.112 | 6 / 8 | Igor SUSHKO | | | Kenji KOBAYASHI | | |
| | 15 | 91 | GTC | 3 | AAI-RSTRADA | MCLAREN MP4-12C GT3 | 1'40.181 | 5.928 | 0.069 | 163.971 | Tatsuya TANIGAWA | 1'40.181 | 6 / 6 | Marco SEEFRIED | | | Jun San CHEN | | |
| | 16 | 92 | | 4 | AAI-RSTRADA | MCLAREN MP4-12C GT3 | 1'41.237 | 6.984 | 1.056 | 162.261 | Yasu KIKUCHI | 1'41.237 | 9 / 10 | Morris CHEN | | | | | |
| | 17 | 70 | GTE | 1 | TAISAN KEN ENDLESS | FERRARI 458 GTE | 1'41.399 | 7.146 | 0.162 | 162.002 | Akira IIDA | 1'41.399 | 5 / 6 | Shinji NAKANO | | | Shogo MITSUYAMA | | |
| | 18 | 37 | GTC | 5 | BBT | LAMBORGHINI GALLARDO GT3 | 1'41.412 | 7.159 | 0.013 | 161.981 | Anthony LIU | | | Davide RIZZO | 1'41.412 | 4 / 10 | Massimiliano WISER | | |
| | 19 | 9 | | 6 | PACIFIC DIRECTION RACING | PORSCHE 911 GT3 R (997) | 1'41.593 | 7.340 | 0.181 | 161.692 | Yuya SAKAMOTO | 1'41.593 | 5 / 13 | You YOKOMAKU | | | Akira MIZUTANI | | |
| | 20 | 26 | | 7 | Team TAISAN KEN ENDLESS | PORSCHE 996 GT300 | 1'43.799 | 9.546 | 2.206 | 158.256 | Akihiro ASAI | | | Naoya GAMOU | 1'43.799 | 5 / 6 | | | |